Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55446 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one 390.2571 391.2651 —
P55448 Myrrhanol A 460.3838 461.3899 —
P55449 1-(3,4-Dichlorophenyl)urea 203.9825 204.9901 —
P55452 Flunixin 296.0745 297.0820 —
P55455 557.1670 558.1718 —
P55456 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1027 503.1103 —
P55458 Rosmadial 344.1611 345.1687 —
P55459 7-Methyl-6,8-bis(methylthio)pyrrolo(1,2-a)pyrazine 224.0408 225.0488 —
P55460 Propyl 1-(propylsulfinyl)propyl disulfide 240.0673 241.0731 —
P55461 Losmapimod 383.1986 384.2078 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G131800 hypothetical protein NA 0
Glyma.20G131900 hypothetical protein NA 0
Glyma.20G132000 hypothetical protein AT4G33910:AT4G33910:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0
Glyma.20G132100 hypothetical protein AT4G15090:FAR1:FRS (FAR1 Related Sequences) transcription factor family 0
Glyma.20G132200 hypothetical protein AT1G49870:AT1G49870:myosin-2 heavy chain-like protein 0
Glyma.20G132300 hypothetical protein AT2G23090:AT2G23090:Uncharacterized protein family SERF 0
Glyma.20G132400 hypothetical protein NA 0
Glyma.20G132500 hypothetical protein AT4G33905:AT4G33905:Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0
Glyma.20G132600 hypothetical protein AT4G33890:AT4G33890:transcriptional regulator of RNA polII, SAGA, subunit 0
Glyma.20G132700 hypothetical protein AT3G19570:SCO3:SNOWY COTYLEDON protein (DUF566)__AT1G49890:QWRF2:QWRF motif protein (DUF566) 0