Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55462 Schidigeragenin B 428.2908 429.2971 —
P55464 131.9595 132.9668 —
P55465 Medicagol 296.0316 297.0374 —
P55468 N-Desmethylzopiclone 374.0907 375.0977 —
P55469 Minwanensin 284.1634 285.1694 —
P55470 YM 47525 618.3033 619.3107 —
P55471 LysW-L-glutamyl 5-phosphate 356.0603 357.0673 —
P55474 Homoneoharringtonine 549.2443 550.2512 —
P55476 175.9825 176.9896 —
P55477 Ajugapantin A 550.2419 551.2490 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G130500 hypothetical protein AT2G15000:AT2G15000:caspase-6 protein__AT4G34265:AT4G34265:uncharacterized protein 0
Glyma.20G130600 hypothetical protein NA 0
Glyma.20G130700 hypothetical protein AT4G34270:AT4G34270:TIP41-like family protein 0
Glyma.20G130800 hypothetical protein AT3G19510:HAT3.1:Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein 0
Glyma.20G131100 hypothetical protein NA 0
Glyma.20G131300 hypothetical protein AT3G19540:AT3G19540:glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 0
Glyma.20G131400 hypothetical protein AT5G02860:AT5G02860:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G131500 hypothetical protein AT4G33920:AT4G33920:Protein phosphatase 2C family protein 0
Glyma.20G131600 hypothetical protein AT1G49850:AT1G49850:RING/U-box superfamily protein 0
Glyma.20G131700 hypothetical protein NA 0