Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55418 216.8746 217.8826 —
P55419 (+)-Neoacrimarine-H 567.1910 568.1955 —
P55425 N-[(2S)-3-[4-[2-(5-Methyl-2-phenyl-1,3-oxazol-4-yl)ethoxy]phenyl]-2-[[(Z)-4-oxo-4-[4-(trifluoromethyl)phenyl]but-2-en-2-yl]amino]propyl]propanamide 619.2572 620.2615 —
P55430 Tricornoside D 536.1464 537.1540 —
P55431 Luteolin 7-(2''-glucosyllactate) 520.1280 521.1380 —
P55433 24-ethyl-5alpha-cholest-25-en-3alpha,12alpha,16alpha-triol 446.3686 447.3753 —
P55434 Foetisulfide A 224.0393 225.0460 —
P55435 Butyl-meta-cycloheptylprodiginine 391.2601 392.2651 —
P55439 (4S*,6S*)-Dihydroxy-6-(14'Z-nonadecenyl)-2-cyclohexenone 392.3353 393.3424 —
P55441 538.1411 539.1490 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G130500 hypothetical protein AT2G15000:AT2G15000:caspase-6 protein__AT4G34265:AT4G34265:uncharacterized protein 0
Glyma.20G130600 hypothetical protein NA 0
Glyma.20G130700 hypothetical protein AT4G34270:AT4G34270:TIP41-like family protein 0
Glyma.20G130800 hypothetical protein AT3G19510:HAT3.1:Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein 0
Glyma.20G131100 hypothetical protein NA 0
Glyma.20G131300 hypothetical protein AT3G19540:AT3G19540:glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 0
Glyma.20G131400 hypothetical protein AT5G02860:AT5G02860:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G131500 hypothetical protein AT4G33920:AT4G33920:Protein phosphatase 2C family protein 0
Glyma.20G131600 hypothetical protein AT1G49850:AT1G49850:RING/U-box superfamily protein 0
Glyma.20G131700 hypothetical protein NA 0