Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P49100 Glucoerysodine 461.2087 462.2138 191
P52536 3-Hydroxyisorenieratene 544.3713 545.3788 191
P08871 Cl-amidine 310.1188 311.1265 190
P18591 704.3079 705.3180 190
P25767 4'-Oxonebramine 304.1750 305.1815 190
P27511 593.2758 594.2841 190
P32289 N-[6-(2,3-Difluorophenyl)-2-oxo-1-(2,2,2-trifluoroethyl)azepan-3-yl]-4-(2-oxo-3H-imidazo[4,5-b]pyridin-1-yl)piperidine-1-carboxamide 566.2069 567.2152 190
P32698 229.1381 230.1452 190
P35852 515.7317 516.7406 190
P36564 Alloeremophilone 218.1657 437.3379 190

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G130500 hypothetical protein AT2G15000:AT2G15000:caspase-6 protein__AT4G34265:AT4G34265:uncharacterized protein 0
Glyma.20G130600 hypothetical protein NA 0
Glyma.20G130700 hypothetical protein AT4G34270:AT4G34270:TIP41-like family protein 0
Glyma.20G130800 hypothetical protein AT3G19510:HAT3.1:Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein 0
Glyma.20G131100 hypothetical protein NA 0
Glyma.20G131300 hypothetical protein AT3G19540:AT3G19540:glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 0
Glyma.20G131400 hypothetical protein AT5G02860:AT5G02860:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G131500 hypothetical protein AT4G33920:AT4G33920:Protein phosphatase 2C family protein 0
Glyma.20G131600 hypothetical protein AT1G49850:AT1G49850:RING/U-box superfamily protein 0
Glyma.20G131700 hypothetical protein NA 0