Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55235 607.8970 608.9062 —
P55236 Norhygrine 127.0985 128.1063 —
P55237 Briaexcavatolide K 584.2479 585.2553 —
P55238 607.9278 608.9337 —
P55239 609.5829 610.5918 —
P55243 607.9804 608.9906 —
P55244 Beilschmieflavonoid A 614.2514 615.2599 —
P55246 Dicerandrol A 666.1878 667.1909 —
P55247 609.5259 610.5340 —
P55248 Ilmofosine 525.3701 526.3741 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G129300 hypothetical protein AT4G34215:AT4G34215:carbohydrate esterase, putative (DUF303) 0
Glyma.20G129400 hypothetical protein AT4G34200:EDA9:D-3-phosphoglycerate dehydrogenase 0
Glyma.20G129600 hypothetical protein AT4G34190:SEP1:stress enhanced protein 1 0
Glyma.20G129700 hypothetical protein AT1G49820:MTK:S-methyl-5-thioribose kinase 0
Glyma.20G129800 hypothetical protein NA 0
Glyma.20G130000 hypothetical protein NA 0
Glyma.20G130100 hypothetical protein NA 0
Glyma.20G130200 hypothetical protein NA 0
Glyma.20G130300 hypothetical protein AT2G15020:AT2G15020:uncharacterized protein 0
Glyma.20G130400 hypothetical protein AT4G34260:FUC95A:1,2-alpha-L-fucosidase 0