Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55217 Cryptophycin 52 668.2910 669.3012 —
P55219 Anadur 506.3390 507.3476 —
P55221 609.0220 610.0260 —
P55224 Hicksoane C 608.0116 609.0195 —
P55225 Haloxyline B 435.3725 436.3803 —
P55226 690.1733 691.1811 —
P55227 Pectenol A 582.4057 583.4119 —
P55228 609.6882 610.6931 —
P55232 609.7950 610.7988 —
P55233 667.3010 668.3098 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G127500 hypothetical protein AT4G34190:SEP1:stress enhanced protein 1 0
Glyma.20G127900 hypothetical protein NA 0
Glyma.20G128000 hypothetical protein NA 0
Glyma.20G128300 hypothetical protein NA 0
Glyma.20G128400 hypothetical protein NA 0
Glyma.20G128500 hypothetical protein NA 0
Glyma.20G128700 hypothetical protein AT2G15240:AT2G15240:UNC-50 family protein 0
Glyma.20G128800 hypothetical protein AT2G15270:AT2G15270:PRKR-interacting protein 0
Glyma.20G128900 hypothetical protein AT2G15280:AT2G15280:Reticulon family protein 0
Glyma.20G129100 hypothetical protein AT2G15290:TIC21:translocon at inner membrane of chloroplasts 21 0