Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P39464 Arginylvaline 273.1778 274.1868 157
P46016 Lignan 238.1723 239.1780 157
P49105 Methyl camaralate 542.3555 543.3634 157
P50718 N-(9Z,12Z-octadecadienoyl)-taurine 387.2449 388.2513 157
P55581 Chlovalicin 332.1407 333.1480 157
P01915 Cardiospermin 275.0986 276.1051 156
P06888 Ethotoin 204.0868 205.0943 156
P08139 Goniolactone B 472.1526 473.1587 156
P12066 Sildenafil 474.2105 475.2149 156
P15974 Dihydro-3-methyl-2(3H)-furanone 100.0512 101.0588 156

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G126000 hypothetical protein AT1G14650:AT1G14650:SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 0
Glyma.20G126200 hypothetical protein NA 0
Glyma.20G126300 hypothetical protein AT1G23000:AT1G23000:Heavy metal transport/detoxification superfamily protein 0
Glyma.20G126600 hypothetical protein AT3G19420:PEN2:PTEN 2 0
Glyma.20G126800 hypothetical protein AT4G35220:AT4G35220:Cyclase family protein 0
Glyma.20G126900 hypothetical protein NA 0
Glyma.20G127000 hypothetical protein NA 0
Glyma.20G127100 hypothetical protein NA 0
Glyma.20G127200 hypothetical protein NA 0
Glyma.20G127300 hypothetical protein AT2G15320:AT2G15320:Leucine-rich repeat (LRR) family protein 0