Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G124300 hypothetical protein NA 0
Glyma.20G124400 hypothetical protein NA 0
Glyma.20G124900 hypothetical protein NA 0
Glyma.20G125100 hypothetical protein AT5G60370:AT5G60370:exonuclease V-like protein 0
Glyma.20G125200 hypothetical protein AT1G71100:RSW10:Ribose 5-phosphate isomerase, type A protein 0
Glyma.20G125300 hypothetical protein NA 0
Glyma.20G125400 hypothetical protein NA 0
Glyma.20G125500 hypothetical protein NA 0
Glyma.20G125700 hypothetical protein AT1G71080:AT1G71080:RNA polymerase II transcription elongation factor 0
Glyma.20G125800 hypothetical protein AT1G71070:AT1G71070:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0