Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P37253 913.9687 914.9746 146
P44756 Methyl (2E)-2-(10,13-dimethyl-11-oxo-3-pyrrolidin-1-yl-2,7,8,9,12,14,15,16-octahydro-1H-cyclopenta[a]phenanthren-17-ylidene)acetate 409.2568 410.2631 146
P07505 Benzamide, 5-((1,5-bis(4-methoxyphenyl)-1H-pyrazol-3-yl)dimethoxymethyl)-2-chloro- 507.1535 508.1626 145
P07895 Sporovexin C 309.1220 310.1320 145
P10934 Asperuloide C 602.2568 603.2623 145
P14156 Validamycin G 513.2050 514.2127 145
P16247 Petasiphyll A 650.2751 651.2810 145
P21485 Newbouldioside C 976.3055 977.3181 145
P32522 Almitrine 477.2433 478.2469 145
P35761 3,13-Di-O-beta-D-glucopyranosilgeranyllinalol 630.3675 631.3783 145

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G120300 hypothetical protein AT4G17770:TPS5:trehalose phosphatase/synthase 5 0
Glyma.20G120400 hypothetical protein NA 0
Glyma.20G120800 hypothetical protein AT2G01200:IAA32:indole-3-acetic acid inducible 32 0
Glyma.20G120900 hypothetical protein AT1G15060:AT1G15060:alpha/beta hydrolase family protein 0
Glyma.20G121000 hypothetical protein AT1G49540:ELP2:elongator protein 2 0
Glyma.20G121100 hypothetical protein AT2G01190:PDE331:Octicosapeptide/Phox/Bem1p family protein 0
Glyma.20G121200 hypothetical protein AT2G01180:PAP1:phosphatidic acid phosphatase 1 0
Glyma.20G121300 hypothetical protein AT1G15080:LPP2:lipid phosphate phosphatase 2 0
Glyma.20G121400 hypothetical protein AT2G01170:BAT1:bidirectional amino acid transporter 1 0
Glyma.20G121500 hypothetical protein AT2G01170:BAT1:bidirectional amino acid transporter 1 0