Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55180 Haloxyline B 435.3680 436.3770 —
P55183 Ethyl (2S,3S)-3-[[(2S)-1-[[(2S)-1-hydroxypent-4-yn-2-yl]amino]-4-methyl-1-oxopentan-2-yl]carbamoyl]oxirane-2-carboxylate 354.1772 355.1835 —
P55184 Speciosin D 194.0581 195.0659 —
P55188 Prop-2-enylcyclohexane 124.1246 125.1317 —
P55189 15-Acetoxyverruculogen 569.2418 570.2499 —
P55191 609.0476 610.0568 —
P55194 Sarglaperoxide A 384.1932 385.2011 —
P55195 3-Hydroxy-p-mentha-1,8-dien-7-al 166.0982 167.1053 —
P55197 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2686 417.2763 —
P55198 775.2278 776.2313 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G120300 hypothetical protein AT4G17770:TPS5:trehalose phosphatase/synthase 5 0
Glyma.20G120400 hypothetical protein NA 0
Glyma.20G120800 hypothetical protein AT2G01200:IAA32:indole-3-acetic acid inducible 32 0
Glyma.20G120900 hypothetical protein AT1G15060:AT1G15060:alpha/beta hydrolase family protein 0
Glyma.20G121000 hypothetical protein AT1G49540:ELP2:elongator protein 2 0
Glyma.20G121100 hypothetical protein AT2G01190:PDE331:Octicosapeptide/Phox/Bem1p family protein 0
Glyma.20G121200 hypothetical protein AT2G01180:PAP1:phosphatidic acid phosphatase 1 0
Glyma.20G121300 hypothetical protein AT1G15080:LPP2:lipid phosphate phosphatase 2 0
Glyma.20G121400 hypothetical protein AT2G01170:BAT1:bidirectional amino acid transporter 1 0
Glyma.20G121500 hypothetical protein AT2G01170:BAT1:bidirectional amino acid transporter 1 0