Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55138 2-(4-Methyl-5-thiazolyl)ethyl octanoate 269.1475 270.1553 —
P55139 457.1180 458.1261 —
P55143 Methoxyisobutylisonitrile 113.0832 114.0907 —
P55147 563.5411 564.5502 —
P55149 Androsta-4,16-dien-3-one 270.1954 271.2018 —
P55150 Chatferin 336.2300 337.2352 —
P55155 5-Ethyl-3-methyl-2E,4E,6E-nonatriene 164.1552 165.1623 —
P55156 Platyphylline 337.1879 338.1945 —
P55157 9-Chloro-17beta-hydroxy-17-methylandrost-4-ene-3,11-dione 350.1686 351.1759 —
P55159 Liangshanin C 372.1911 373.1958 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G120300 hypothetical protein AT4G17770:TPS5:trehalose phosphatase/synthase 5 0
Glyma.20G120400 hypothetical protein NA 0
Glyma.20G120800 hypothetical protein AT2G01200:IAA32:indole-3-acetic acid inducible 32 0
Glyma.20G120900 hypothetical protein AT1G15060:AT1G15060:alpha/beta hydrolase family protein 0
Glyma.20G121000 hypothetical protein AT1G49540:ELP2:elongator protein 2 0
Glyma.20G121100 hypothetical protein AT2G01190:PDE331:Octicosapeptide/Phox/Bem1p family protein 0
Glyma.20G121200 hypothetical protein AT2G01180:PAP1:phosphatidic acid phosphatase 1 0
Glyma.20G121300 hypothetical protein AT1G15080:LPP2:lipid phosphate phosphatase 2 0
Glyma.20G121400 hypothetical protein AT2G01170:BAT1:bidirectional amino acid transporter 1 0
Glyma.20G121500 hypothetical protein AT2G01170:BAT1:bidirectional amino acid transporter 1 0