Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P37253 913.9687 914.9746 146
P44756 Methyl (2E)-2-(10,13-dimethyl-11-oxo-3-pyrrolidin-1-yl-2,7,8,9,12,14,15,16-octahydro-1H-cyclopenta[a]phenanthren-17-ylidene)acetate 409.2568 410.2631 146
P07505 Benzamide, 5-((1,5-bis(4-methoxyphenyl)-1H-pyrazol-3-yl)dimethoxymethyl)-2-chloro- 507.1535 508.1626 145
P07895 Sporovexin C 309.1220 310.1320 145
P10934 Asperuloide C 602.2568 603.2623 145
P14156 Validamycin G 513.2050 514.2127 145
P16247 Petasiphyll A 650.2751 651.2810 145
P21485 Newbouldioside C 976.3055 977.3181 145
P32522 Almitrine 477.2433 478.2469 145
P35761 3,13-Di-O-beta-D-glucopyranosilgeranyllinalol 630.3675 631.3783 145

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G116600 hypothetical protein NA 0
Glyma.20G116700 hypothetical protein NA 0
Glyma.20G116800 hypothetical protein AT1G68290:ENDO2:endonuclease 2 0
Glyma.20G117000 hypothetical protein AT1G25340:MYB116:myb domain protein 116__AT1G68320:MYB62:myb domain protein 62 0
Glyma.20G117100 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 0
Glyma.20G117200 hypothetical protein AT1G68330:AT1G68330:membrane-associated kinase regulator 0
Glyma.20G117400 hypothetical protein AT1G25370:AT1G25370: 0
Glyma.20G117500 hypothetical protein AT1G68350:AT1G68350:cotton fiber protein 0
Glyma.20G117700 hypothetical protein NA 0
Glyma.20G117800 hypothetical protein NA 0