Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P32263	4-Hydroxydemethylmedicarpin	272.0676	273.0760	147
P33257	2,5-Diisopropyl-3-methylphenol	192.1493	193.1574	147
P36560	10-Hydroxy-cadin-4-en-3-one	236.1744	473.3583	147
P43847	Didemniserinolipid B	663.4039	664.4119	147
P44113		645.4166	646.4222	147
P45062	Valylproline	214.1328	215.1400	147
P46904		455.6709	456.6799	147
P47349		797.9366	798.9377	147
P47397	Prolyl-Arginine	271.1624	272.1709	147
P51669		353.1550	354.1626	147

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G116600	hypothetical protein	NA
Glyma.20G116700	hypothetical protein	NA
Glyma.20G116800	hypothetical protein	AT1G68290:ENDO2:endonuclease 2
Glyma.20G117000	hypothetical protein	AT1G25340:MYB116:myb domain protein 116__AT1G68320:MYB62:myb domain protein 62
Glyma.20G117100	hypothetical protein	AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS
Glyma.20G117200	hypothetical protein	AT1G68330:AT1G68330:membrane-associated kinase regulator
Glyma.20G117400	hypothetical protein	AT1G25370:AT1G25370:
Glyma.20G117500	hypothetical protein	AT1G68350:AT1G68350:cotton fiber protein
Glyma.20G117700	hypothetical protein	NA
Glyma.20G117800	hypothetical protein	NA