Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P00823	(-)-Mintlactone	306.0213	307.0281	164
P07492	Polypropylene glycol (m w 1,200-3,000)	134.0949	135.1012	164
P10281	Undeca-2,4,6-trienedioyl-CoA	959.2076	960.2157	164
P15662		513.2875	514.2951	164
P18935	Marchantin P	438.1840	439.1899	164
P22654	Excavatolide D	524.2197	525.2274	164
P32650	Thonzylamine	286.1756	287.1822	164
P34351	Arginylglutamine	302.1710	605.3489	164
P48467	13-Apo-beta-carotenone	258.1964	259.2031	164
P01110	(R)-11,12,13-Trinor-1(5),6,9-guaiatrien-8-one	174.1043	175.1111	163

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G116600	hypothetical protein	NA
Glyma.20G116700	hypothetical protein	NA
Glyma.20G116800	hypothetical protein	AT1G68290:ENDO2:endonuclease 2
Glyma.20G117000	hypothetical protein	AT1G25340:MYB116:myb domain protein 116__AT1G68320:MYB62:myb domain protein 62
Glyma.20G117100	hypothetical protein	AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS
Glyma.20G117200	hypothetical protein	AT1G68330:AT1G68330:membrane-associated kinase regulator
Glyma.20G117400	hypothetical protein	AT1G25370:AT1G25370:
Glyma.20G117500	hypothetical protein	AT1G68350:AT1G68350:cotton fiber protein
Glyma.20G117700	hypothetical protein	NA
Glyma.20G117800	hypothetical protein	NA