Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P54666	3-Caffeoyl-4-feruloylquinic acid	530.1391	531.1460	147
P10107	Hygrocin B	507.1872	508.1911	146
P11442	Bunazosin	373.2181	374.2261	146
P15842		505.1794	506.1878	146
P20514	Pentacarboxyl porphyrinogen III	700.2711	701.2769	146
P21007	Notoamide S	435.2469	436.2553	146
P22172		593.9022	594.9029	146
P25341	Trifenmorph	329.1779	330.1831	146
P30652	Isonigerone	570.1436	571.1515	146
P31493	Clocinizine	402.1832	403.1902	146

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G115300		hypothetical protein	AT3G25890:CRF11:Integrase-type DNA-binding superfamily protein
Glyma.20G115500		hypothetical protein	AT1G68530:KCS6:3-ketoacyl-CoA synthase 6
Glyma.20G115600		hypothetical protein	AT1G68520:BBX14:B-box type zinc finger protein with CCT domain-containing protein
Glyma.20G115700		hypothetical protein	NA
Glyma.20G115800		hypothetical protein	NA
Glyma.20G115900		hypothetical protein	NA
Glyma.20G116000		hypothetical protein	AT1G68490:AT1G68490:translocase subunit seca
Glyma.20G116200	Ln		AT1G68480:JAG:C2H2 and C2HC zinc fingers superfamily protein
Glyma.20G116400		hypothetical protein	AT1G77420:AT1G77420:alpha/beta-Hydrolases superfamily protein
Glyma.20G116500		hypothetical protein	AT3G19160:IPT8:ATP/ADP isopentenyltransferase