Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P49100 Glucoerysodine 461.2087 462.2138 191
P52536 3-Hydroxyisorenieratene 544.3713 545.3788 191
P08871 Cl-amidine 310.1188 311.1265 190
P18591 704.3079 705.3180 190
P25767 4'-Oxonebramine 304.1750 305.1815 190
P27511 593.2758 594.2841 190
P32289 N-[6-(2,3-Difluorophenyl)-2-oxo-1-(2,2,2-trifluoroethyl)azepan-3-yl]-4-(2-oxo-3H-imidazo[4,5-b]pyridin-1-yl)piperidine-1-carboxamide 566.2069 567.2152 190
P32698 229.1381 230.1452 190
P35852 515.7317 516.7406 190
P36564 Alloeremophilone 218.1657 437.3379 190

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G115300 hypothetical protein AT3G25890:CRF11:Integrase-type DNA-binding superfamily protein 0
Glyma.20G115500 hypothetical protein AT1G68530:KCS6:3-ketoacyl-CoA synthase 6 0
Glyma.20G115600 hypothetical protein AT1G68520:BBX14:B-box type zinc finger protein with CCT domain-containing protein 0
Glyma.20G115700 hypothetical protein NA 0
Glyma.20G115800 hypothetical protein NA 0
Glyma.20G115900 hypothetical protein NA 0
Glyma.20G116000 hypothetical protein AT1G68490:AT1G68490:translocase subunit seca 0
Glyma.20G116200 Ln AT1G68480:JAG:C2H2 and C2HC zinc fingers superfamily protein 0
Glyma.20G116400 hypothetical protein AT1G77420:AT1G77420:alpha/beta-Hydrolases superfamily protein 0
Glyma.20G116500 hypothetical protein AT3G19160:IPT8:ATP/ADP isopentenyltransferase 0