Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08589 Benzomalvin D 381.1494 382.1579 250
P23519 Lapathoside A 986.2755 987.2789 250
P44926 Eunicellin 522.2769 523.2852 250
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 467.2613 249
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 596.3657 249
P11244 Maculalactone K 532.1815 533.1890 248
P18979 Justalakonin 528.1312 529.1358 247
P49160 924.4051 925.4092 247
P30313 Sufotidine 421.2175 422.2210 246
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 455.3485 246

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G113200 hypothetical protein AT5G04280:AtRZ-1c:RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein 0
Glyma.20G113500 hypothetical protein AT1G25500:AT1G25500:Plasma-membrane choline transporter family protein 0
Glyma.20G113600 hypothetical protein AT1G68640:PAN:bZIP transcription factor family protein 0
Glyma.20G113700 hypothetical protein NA 0
Glyma.20G113900 hypothetical protein NA 0
Glyma.20G114700 hypothetical protein NA 0
Glyma.20G114800 hypothetical protein AT1G13360:AT1G13360:uncharacterized protein__AT3G25870:AT3G25870:uncharacterized protein 0
Glyma.20G114900 hypothetical protein NA 0
Glyma.20G115000 hypothetical protein AT4G20740:EMB3131:Pentatricopeptide repeat (PPR-like) superfamily protein 0
Glyma.20G115200 hypothetical protein NA 0