Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55367 157.9660 158.9738 —
P55373 625.1241 626.1300 —
P55374 Pyridomacrolidin 581.2199 582.2304 —
P55377 607.8877 608.8918 —
P55379 Pre-alcaligin 422.2002 423.2039 —
P55381 Hydroxynybomycin 314.0896 315.0962 —
P55383 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1080 503.1150 —
P55387 257.9007 258.9083 —
P55389 (4R)-4-Hydroxyipecoside 581.2079 582.2145 —
P55390 Withaperuvin H 578.2554 579.2585 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G112000 hypothetical protein NA 0
Glyma.20G112100 hypothetical protein AT5G04780:AT5G04780:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G112200 hypothetical protein NA 0
Glyma.20G112300 hypothetical protein NA 0
Glyma.20G112400 hypothetical protein AT5G04820:OFP13:ovate family protein 13 0
Glyma.20G112500 hypothetical protein NA 0
Glyma.20G112700 hypothetical protein NA 0
Glyma.20G112800 hypothetical protein AT5G04290:KTF1:kow domain-containing transcription factor 1 0
Glyma.20G113000 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 0
Glyma.20G113100 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 0