Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55250 624.9316 625.9393 —
P55251 283.2792 284.2855 —
P55252 N1,N5,N10-Tricaffeoyl spermidine 631.2498 632.2512 —
P55253 608.9013 609.9125 —
P55258 608.9253 609.9268 —
P55259 608.6906 609.6976 —
P55260 624.9479 625.9558 —
P55262 6-Ketomyristic acid 242.1902 243.1973 —
P55265 Morellic acid 560.2383 561.2470 —
P55271 541.2613 542.2687 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G112000 hypothetical protein NA 0
Glyma.20G112100 hypothetical protein AT5G04780:AT5G04780:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G112200 hypothetical protein NA 0
Glyma.20G112300 hypothetical protein NA 0
Glyma.20G112400 hypothetical protein AT5G04820:OFP13:ovate family protein 13 0
Glyma.20G112500 hypothetical protein NA 0
Glyma.20G112700 hypothetical protein NA 0
Glyma.20G112800 hypothetical protein AT5G04290:KTF1:kow domain-containing transcription factor 1 0
Glyma.20G113000 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 0
Glyma.20G113100 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 0