Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55395 407.3585 408.3657 —
P55396 (2E)-4-Hydroxyhexadecenoylcarnitine 413.3150 414.3221 —
P55398 Guangsangon M 610.1764 611.1829 —
P55399 5-Oxooctyl glucosinolate 445.1089 446.1162 —
P55401 Saligcinnamide 490.3950 491.4025 —
P55402 Myobontioside B 554.1645 555.1716 —
P55405 Cer(d17:1/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 627.4861 628.4955 —
P55407 Dibutylphthalic acid 278.1498 279.1577 —
P55414 Terminamine C 632.4352 633.4429 —
P55417 621.2630 622.2681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G110700 hypothetical protein NA 0
Glyma.20G110800 hypothetical protein AT5G10000:FD4:ferredoxin 4 0
Glyma.20G111000 GmFAD2-1b NA 0
Glyma.20G111100 hypothetical protein AT3G54300:VAMP727:vesicle-associated membrane protein 727 0
Glyma.20G111400 hypothetical protein NA 0
Glyma.20G111500 hypothetical protein NA 0
Glyma.20G111600 hypothetical protein NA 0
Glyma.20G111700 hypothetical protein NA 0
Glyma.20G111800 1-3-1B AT5G04760:AT5G04760:Duplicated homeodomain-like superfamily protein 0
Glyma.20G111900 hypothetical protein AT3G10600:CAT7:cationic amino acid transporter 7__AT5G04770:CAT6:cationic amino acid transporter 6 0