Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G110700 hypothetical protein NA 0
Glyma.20G110800 hypothetical protein AT5G10000:FD4:ferredoxin 4 0
Glyma.20G111000 GmFAD2-1b NA 0
Glyma.20G111100 hypothetical protein AT3G54300:VAMP727:vesicle-associated membrane protein 727 0
Glyma.20G111400 hypothetical protein NA 0
Glyma.20G111500 hypothetical protein NA 0
Glyma.20G111600 hypothetical protein NA 0
Glyma.20G111700 hypothetical protein NA 0
Glyma.20G111800 1-3-1B AT5G04760:AT5G04760:Duplicated homeodomain-like superfamily protein 0
Glyma.20G111900 hypothetical protein AT3G10600:CAT7:cationic amino acid transporter 7__AT5G04770:CAT6:cationic amino acid transporter 6 0