Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G110700 hypothetical protein NA 0
Glyma.20G110800 hypothetical protein AT5G10000:FD4:ferredoxin 4 0
Glyma.20G111000 GmFAD2-1b NA 0
Glyma.20G111100 hypothetical protein AT3G54300:VAMP727:vesicle-associated membrane protein 727 0
Glyma.20G111400 hypothetical protein NA 0
Glyma.20G111500 hypothetical protein NA 0
Glyma.20G111600 hypothetical protein NA 0
Glyma.20G111700 hypothetical protein NA 0
Glyma.20G111800 1-3-1B AT5G04760:AT5G04760:Duplicated homeodomain-like superfamily protein 0
Glyma.20G111900 hypothetical protein AT3G10600:CAT7:cationic amino acid transporter 7__AT5G04770:CAT6:cationic amino acid transporter 6 0