Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55049 Xylaroside B 328.1519 329.1600 —
P55052 284.2780 285.2841 —
P55053 600.7683 601.7714 —
P55057 Cephasugine 347.1721 348.1791 —
P55059 3-Methylnonanoylcarnitine 315.2432 316.2523 —
P55060 265.1400 266.1458 —
P55061 3Z,6Z,9Z-Octadecatriene 248.2467 249.2551 —
P55062 ES 242-1 604.2300 605.2419 —
P55063 Nandrolone phenpropionate 406.2498 407.2583 —
P55064 Yuccaol A 496.1147 497.1224 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G110700 hypothetical protein NA 0
Glyma.20G110800 hypothetical protein AT5G10000:FD4:ferredoxin 4 0
Glyma.20G111000 GmFAD2-1b NA 0
Glyma.20G111100 hypothetical protein AT3G54300:VAMP727:vesicle-associated membrane protein 727 0
Glyma.20G111400 hypothetical protein NA 0
Glyma.20G111500 hypothetical protein NA 0
Glyma.20G111600 hypothetical protein NA 0
Glyma.20G111700 hypothetical protein NA 0
Glyma.20G111800 1-3-1B AT5G04760:AT5G04760:Duplicated homeodomain-like superfamily protein 0
Glyma.20G111900 hypothetical protein AT3G10600:CAT7:cationic amino acid transporter 7__AT5G04770:CAT6:cationic amino acid transporter 6 0