Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31215 966.3363 967.3449 180
P37602 (6R)-9,10-Dihydroxy-4,7-megastigmadien-3-one-9-O-beta-D-glucopyranoside 386.1922 387.2002 180
P41095 423.3575 424.3622 180
P49211 Bamifylline 385.2106 386.2173 180
P06876 Lembyne A 342.0021 343.0076 179
P14986 N-(2-hydroxyhexadecanoyl)-sphinganine 555.5217 556.5296 179
P21946 999.3356 1000.3371 179
P23960 Upunaphenol N 934.2723 935.2842 179
P29027 Bazzanin J 492.0855 493.0949 179
P35945 475.1093 476.1172 179

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G106100 hypothetical protein NA 0
Glyma.20G106500 hypothetical protein NA 0
Glyma.20G106600 hypothetical protein AT2G20920:AT2G20920:chaperone (DUF3353) 0
Glyma.20G107100 hypothetical protein AT2G16940:AT2G16940:Splicing factor, CC1-like protein 0
Glyma.20G107400 hypothetical protein NA 0
Glyma.20G107800 hypothetical protein AT1G68010:HPR:hydroxypyruvate reductase 0
Glyma.20G108100 hypothetical protein NA 0
Glyma.20G108200 hypothetical protein NA 0
Glyma.20G108300 hypothetical protein NA 0
Glyma.20G108500 hypothetical protein AT2G02050:AT2G02050:NADH-ubiquinone oxidoreductase B18 subunit 0