Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P18070 Cymbidine A 949.4154 950.4239 236
P25621 Pseudoanisatin 298.1384 299.1467 236
P47300 534.7868 535.7927 236
P31222 Sufotidine 421.2096 422.2177 235
P03976 Dilmapimod 456.1404 457.1517 234
P53033 7-Oxononane-1,1,9-tricarbaldehyde 226.1222 227.1285 234
P05631 Trimethyl orthoacetate 120.0775 121.0848 233
P13790 317.1926 318.1997 233
P23295 3beta-(4-Iodophenyl)tropan-2beta-carboxylic acid isopropyl ester 413.0800 414.0838 233
P11101 L-beta-aspartyl-L-phenylalanine 280.1044 281.1122 231

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G103700 hypothetical protein AT3G19950:AT3G19950:RING/U-box superfamily protein 0
Glyma.20G104100 hypothetical protein NA 0
Glyma.20G104300 hypothetical protein AT3G19910:AT3G19910:RING/U-box superfamily protein 0
Glyma.20G104400 hypothetical protein AT3G06760:AT3G06760:Drought-responsive family protein 0
Glyma.20G104500 hypothetical protein AT5G08305:AT5G08305:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G104700 hypothetical protein AT2G28910:CXIP4:CAX interacting protein 4 0
Glyma.20G104800 hypothetical protein NA 0
Glyma.20G105200 hypothetical protein NA 0
Glyma.20G105800 hypothetical protein AT5G27280:AT5G27280:Zim17-type zinc finger protein 0
Glyma.20G106000 hypothetical protein NA 0