Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13883 Kaempferol 3-O-caffeoyl-sophoroside 7-O-glucoside 934.2391 935.2481 158
P29430 Benzaldehyde 106.0416 107.0484 158
P41373 3-Benzoyloxy-6-oxo-12-ursen-28-oic acid 574.3653 575.3707 158
P45179 Spicataxine 669.3432 670.3494 158
P50043 2,5-Dimethylfuran 96.0579 97.0652 158
P05656 6,7-Dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine 289.1577 290.1655 157
P22528 Adiposin 2 661.2467 662.2558 157
P29660 Artemether 298.1742 299.1810 157
P34088 2'-O-(alpha-D-Manp)-6'-O-(alpha-D-Manp-1->6-alpha-D-Manp)-(1-heptadecanoyl-sn-glycero-3-phospho-1'-myo-inositol) 1072.4778 1073.4820 157
P36081 173.1252 174.1316 157

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G102500 hypothetical protein AT5G23340:AT5G23340:RNI-like superfamily protein 0
Glyma.20G102600 hypothetical protein AT3G19970:AT3G19970:alpha/beta-Hydrolases superfamily protein 0
Glyma.20G102700 Cyclic pyranopterin monophosphate synthase, mitochondrial AT1G01290:CNX3:cofactor of nitrate reductase and xanthine dehydrogenase 3 0
Glyma.20G102800 hypothetical protein NA 0
Glyma.20G103000 hypothetical protein NA 0
Glyma.20G103200 hypothetical protein AT2G29690:ASA2:anthranilate synthase 2 0
Glyma.20G103300 hypothetical protein AT5G23290:PFD5:prefoldin 5 0
Glyma.20G103400 hypothetical protein AT5G23280:AT5G23280:TCP family transcription factor 0
Glyma.20G103500 hypothetical protein NA 0
Glyma.20G103600 hypothetical protein NA 0