Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P12304	Amrubicin	483.1476	484.1512	176
P17789	Kaempferol 3-neohesperidoside-7-(6''-malonylglucoside)	872.2263	873.2325	176
P20561		669.1601	670.1662	176
P29540	Kadsuphilol L	606.2044	607.2073	176
P29563	Sulfocostunolide A	312.1036	313.1116	176
P29935	Acantrifoside A	942.5143	943.5248	176
P36283	Isopropyl dodecylfluorophosphonate	294.2113	295.2185	176
P38088		365.6483	366.6561	176
P00499	1-Pentanesulfonic acid	152.0504	153.0569	175
P32791	Tenuecyclamide A	460.0996	461.1056	175

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G102500	hypothetical protein	AT5G23340:AT5G23340:RNI-like superfamily protein
Glyma.20G102600	hypothetical protein	AT3G19970:AT3G19970:alpha/beta-Hydrolases superfamily protein
Glyma.20G102700	Cyclic pyranopterin monophosphate synthase, mitochondrial	AT1G01290:CNX3:cofactor of nitrate reductase and xanthine dehydrogenase 3
Glyma.20G102800	hypothetical protein	NA
Glyma.20G103000	hypothetical protein	NA
Glyma.20G103200	hypothetical protein	AT2G29690:ASA2:anthranilate synthase 2
Glyma.20G103300	hypothetical protein	AT5G23290:PFD5:prefoldin 5
Glyma.20G103400	hypothetical protein	AT5G23280:AT5G23280:TCP family transcription factor
Glyma.20G103500	hypothetical protein	NA
Glyma.20G103600	hypothetical protein	NA