Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P23451		607.2766	608.2820	221
P05770	1-Methylpiperidin-4-yl butanoate	185.1403	186.1473	220
P09835	10-Formyldihydrofolate	471.1494	472.1544	220
P10595		317.1915	318.1977	220
P12478	5,7-octadienoic acid	140.0839	141.0905	220
P19868	Cohaerin C	482.2267	483.2355	220
P30782	Cryptostigmin IV	1030.4967	1031.5022	220
P40362	BL V	424.0812	425.0898	220
P44001		839.4221	840.4307	220
P05350	Methylinoscavin B	450.1344	451.1421	219

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G102500	hypothetical protein	AT5G23340:AT5G23340:RNI-like superfamily protein
Glyma.20G102600	hypothetical protein	AT3G19970:AT3G19970:alpha/beta-Hydrolases superfamily protein
Glyma.20G102700	Cyclic pyranopterin monophosphate synthase, mitochondrial	AT1G01290:CNX3:cofactor of nitrate reductase and xanthine dehydrogenase 3
Glyma.20G102800	hypothetical protein	NA
Glyma.20G103000	hypothetical protein	NA
Glyma.20G103200	hypothetical protein	AT2G29690:ASA2:anthranilate synthase 2
Glyma.20G103300	hypothetical protein	AT5G23290:PFD5:prefoldin 5
Glyma.20G103400	hypothetical protein	AT5G23280:AT5G23280:TCP family transcription factor
Glyma.20G103500	hypothetical protein	NA
Glyma.20G103600	hypothetical protein	NA