Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P22470 Lithospermoside 329.1094 330.1174 178
P23442 S-(N-Hydroxy-N-methylcarbamoyl)glutathione 380.0975 381.1026 178
P23530 S-Isopropyl 3-methylbut-2-enethioate 158.0767 159.0843 178
P32974 499.7155 500.7233 178
P33573 Torokonine 449.2234 450.2276 178
P37745 Altromycin I 693.2714 694.2799 178
P48147 2-Isopropylfuran 110.0728 111.0801 178
P13948 O-Desmethyl Gefitinib 432.1359 433.1430 177
P18650 U 77803 806.2183 807.2228 177
P26580 475.6741 476.6782 177

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G095400 hypothetical protein AT1G56570:PGN:Tetratricopeptide repeat (TPR)-like superfamily protein 0
Glyma.20G095500 hypothetical protein AT1G09320:AT1G09320:at domain-containing protein 0
Glyma.20G095600 hypothetical protein NA 0
Glyma.20G095700 hypothetical protein AT1G09300:AT1G09300:Metallopeptidase M24 family protein 0
Glyma.20G095800 hypothetical protein AT1G09280:AT1G09280:rhodanese-like domain protein 0
Glyma.20G095900 hypothetical protein NA 0
Glyma.20G096300 hypothetical protein NA 0
Glyma.20G096400 hypothetical protein AT5G26820:IREG3:iron-regulated protein 3 0
Glyma.20G096500 hypothetical protein NA 0
Glyma.20G096600 hypothetical protein NA 0