Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P15114 831.2649 832.2732 290
P32895 PA(5-iso PGF2VI/20:4(5Z,8Z,11Z,14Z)) 766.4415 767.4535 289
P43639 17-Methyloctadecasphinganine 315.3118 316.3193 287
P54549 Akuammine 382.1900 383.2001 286
P04966 Dihydroxytryptamine 192.0882 193.0951 285
P27837 433.2608 434.2695 282
P11278 27-O-Demethylrifamycin SV 683.3041 684.3108 279
P22499 Rosmadial 344.1593 689.3243 279
P08557 Dracorubin 488.1612 489.1703 278
P12127 Paulomycin F 702.1925 703.2042 274

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G095400 hypothetical protein AT1G56570:PGN:Tetratricopeptide repeat (TPR)-like superfamily protein 0
Glyma.20G095500 hypothetical protein AT1G09320:AT1G09320:at domain-containing protein 0
Glyma.20G095600 hypothetical protein NA 0
Glyma.20G095700 hypothetical protein AT1G09300:AT1G09300:Metallopeptidase M24 family protein 0
Glyma.20G095800 hypothetical protein AT1G09280:AT1G09280:rhodanese-like domain protein 0
Glyma.20G095900 hypothetical protein NA 0
Glyma.20G096300 hypothetical protein NA 0
Glyma.20G096400 hypothetical protein AT5G26820:IREG3:iron-regulated protein 3 0
Glyma.20G096500 hypothetical protein NA 0
Glyma.20G096600 hypothetical protein NA 0