Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P39464 Arginylvaline 273.1778 274.1868 157
P46016 Lignan 238.1723 239.1780 157
P49105 Methyl camaralate 542.3555 543.3634 157
P50718 N-(9Z,12Z-octadecadienoyl)-taurine 387.2449 388.2513 157
P55581 Chlovalicin 332.1407 333.1480 157
P01915 Cardiospermin 275.0986 276.1051 156
P06888 Ethotoin 204.0868 205.0943 156
P08139 Goniolactone B 472.1526 473.1587 156
P12066 Sildenafil 474.2105 475.2149 156
P15974 Dihydro-3-methyl-2(3H)-furanone 100.0512 101.0588 156

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G093900 hypothetical protein AT1G56700:AT1G56700:Peptidase C15, pyroglutamyl peptidase I-like protein 0
Glyma.20G094000 hypothetical protein NA 0
Glyma.20G094100 hypothetical protein AT1G09380:UMAMIT25:nodulin MtN21 /EamA-like transporter family protein 0
Glyma.20G094200 hypothetical protein NA 0
Glyma.20G094600 hypothetical protein AT1G09330:AT1G09330:golgi apparatus membrane protein-like protein ECHIDNA protein 0
Glyma.20G094700 Pentatricopeptide repeat-containing protein At1g32415, mitochondrial AT1G32415:AT1G32415:pentatricopeptide (PPR) repeat-containing protein 0
Glyma.20G094800 hypothetical protein NA 0
Glyma.20G094900 hypothetical protein NA 0
Glyma.20G095200 hypothetical protein AT1G56560:A/N-InvA:Plant neutral invertase family protein 0
Glyma.20G095300 hypothetical protein AT4G17760:AT4G17760:PCNA domain-containing protein 0