Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55250 624.9316 625.9393 —
P55251 283.2792 284.2855 —
P55252 N1,N5,N10-Tricaffeoyl spermidine 631.2498 632.2512 —
P55253 608.9013 609.9125 —
P55258 608.9253 609.9268 —
P55259 608.6906 609.6976 —
P55260 624.9479 625.9558 —
P55262 6-Ketomyristic acid 242.1902 243.1973 —
P55265 Morellic acid 560.2383 561.2470 —
P55271 541.2613 542.2687 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G093900 hypothetical protein AT1G56700:AT1G56700:Peptidase C15, pyroglutamyl peptidase I-like protein 0
Glyma.20G094000 hypothetical protein NA 0
Glyma.20G094100 hypothetical protein AT1G09380:UMAMIT25:nodulin MtN21 /EamA-like transporter family protein 0
Glyma.20G094200 hypothetical protein NA 0
Glyma.20G094600 hypothetical protein AT1G09330:AT1G09330:golgi apparatus membrane protein-like protein ECHIDNA protein 0
Glyma.20G094700 Pentatricopeptide repeat-containing protein At1g32415, mitochondrial AT1G32415:AT1G32415:pentatricopeptide (PPR) repeat-containing protein 0
Glyma.20G094800 hypothetical protein NA 0
Glyma.20G094900 hypothetical protein NA 0
Glyma.20G095200 hypothetical protein AT1G56560:A/N-InvA:Plant neutral invertase family protein 0
Glyma.20G095300 hypothetical protein AT4G17760:AT4G17760:PCNA domain-containing protein 0