Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P04074 (+)-Indocarbazostatin 511.1419 512.1448 163
P13384 Humantenidine 342.1566 343.1635 163
P23944 1-hexadecanoyl-2-(4-hydroxy-7-oxo-5E-heptenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) 624.3307 625.3379 163
P26326 277.6307 278.6383 163
P41970 N-Methylheteropsine 554.2240 555.2323 163
P45380 504.7622 505.7713 163
P54259 (5alpha)-27-norcholest-25en-2beta,3alpha,6alpha-triyl tris(hydrogen sulfate) 644.2000 645.2063 163
P54338 1-(9Z-nonadecenoyl)-glycero-3-phosphate 450.2737 451.2821 163
P00005 110.9599 111.9666 162
P00572 138.9972 140.0047 162

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G093900 hypothetical protein AT1G56700:AT1G56700:Peptidase C15, pyroglutamyl peptidase I-like protein 0
Glyma.20G094000 hypothetical protein NA 0
Glyma.20G094100 hypothetical protein AT1G09380:UMAMIT25:nodulin MtN21 /EamA-like transporter family protein 0
Glyma.20G094200 hypothetical protein NA 0
Glyma.20G094600 hypothetical protein AT1G09330:AT1G09330:golgi apparatus membrane protein-like protein ECHIDNA protein 0
Glyma.20G094700 Pentatricopeptide repeat-containing protein At1g32415, mitochondrial AT1G32415:AT1G32415:pentatricopeptide (PPR) repeat-containing protein 0
Glyma.20G094800 hypothetical protein NA 0
Glyma.20G094900 hypothetical protein NA 0
Glyma.20G095200 hypothetical protein AT1G56560:A/N-InvA:Plant neutral invertase family protein 0
Glyma.20G095300 hypothetical protein AT4G17760:AT4G17760:PCNA domain-containing protein 0