Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P00823 (-)-Mintlactone 306.0213 307.0281 164
P07492 Polypropylene glycol (m w 1,200-3,000) 134.0949 135.1012 164
P10281 Undeca-2,4,6-trienedioyl-CoA 959.2076 960.2157 164
P15662 513.2875 514.2951 164
P18935 Marchantin P 438.1840 439.1899 164
P22654 Excavatolide D 524.2197 525.2274 164
P32650 Thonzylamine 286.1756 287.1822 164
P34351 Arginylglutamine 302.1710 605.3489 164
P48467 13-Apo-beta-carotenone 258.1964 259.2031 164
P01110 (R)-11,12,13-Trinor-1(5),6,9-guaiatrien-8-one 174.1043 175.1111 163

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G093900 hypothetical protein AT1G56700:AT1G56700:Peptidase C15, pyroglutamyl peptidase I-like protein 0
Glyma.20G094000 hypothetical protein NA 0
Glyma.20G094100 hypothetical protein AT1G09380:UMAMIT25:nodulin MtN21 /EamA-like transporter family protein 0
Glyma.20G094200 hypothetical protein NA 0
Glyma.20G094600 hypothetical protein AT1G09330:AT1G09330:golgi apparatus membrane protein-like protein ECHIDNA protein 0
Glyma.20G094700 Pentatricopeptide repeat-containing protein At1g32415, mitochondrial AT1G32415:AT1G32415:pentatricopeptide (PPR) repeat-containing protein 0
Glyma.20G094800 hypothetical protein NA 0
Glyma.20G094900 hypothetical protein NA 0
Glyma.20G095200 hypothetical protein AT1G56560:A/N-InvA:Plant neutral invertase family protein 0
Glyma.20G095300 hypothetical protein AT4G17760:AT4G17760:PCNA domain-containing protein 0