Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43253 trans-3-Feruloylcorosolic acid 648.3975 649.4013 167
P45751 N-Acetyl-6-O-L-fucosyl-D-glucosamine 367.1494 368.1559 167
P50045 238.1769 239.1867 167
P50584 Caudoxirene 162.1039 163.1101 167
P04849 Gentisic acid 154.0271 155.0333 166
P11735 Okaramine M 482.2333 483.2390 166
P17290 4,4-Difluoro-17beta-hydroxyandrost-5-en-3-one propionate 380.2170 381.2234 166
P21583 771.2251 772.2359 166
P23922 N-[(2Z)-2-Methoxyiminopropyl]-7H-purin-6-amine 220.1076 221.1144 166
P29865 1069.5175 1070.5247 166

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G088700 hypothetical protein NA 0
Glyma.20G088800 hypothetical protein NA 0
Glyma.20G088900 hypothetical protein AT1G04360:AT1G04360:RING/U-box superfamily protein 0
Glyma.20G089000 hypothetical protein NA 0
Glyma.20G089100 hypothetical protein AT4G01630:EXPA17:expansin A17 0
Glyma.20G089200 hypothetical protein AT5G03050:AT5G03050:knotted 1-binding protein 0
Glyma.20G089300 hypothetical protein AT3G62010:AT3G62010:metal ion-binding protein 0
Glyma.20G089400 hypothetical protein AT3G02200:AT3G02200:Proteasome component (PCI) domain protein 0
Glyma.20G089500 hypothetical protein AT5G03560:AT5G03560:Tetratricopeptide repeat (TPR)-like superfamily protein 0
Glyma.20G089600 hypothetical protein AT5G26742:emb1138:DEAD box RNA helicase (RH3) 0