Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02131 Eustifoline D 221.0836 222.0913 182
P24545 5-Methoxy-3,4-methylenedioxyamphetamine 209.1042 210.1126 182
P37572 28-Glucosyloleanolic acid 3-[rhamnosyl-(1->2)-galactosyl-(1->3)-glucuronide] 1116.5415 1117.5463 182
P43306 102.0458 103.0535 182
P05454 Leonuriside A 332.1106 333.1163 181
P06475 (+)-5,17-Dehydromatrine N-oxide 262.1661 263.1722 181
P16872 Methyl-4-O-caffeoylquinate 368.1086 369.1180 181
P21471 Illifunone C 252.1331 253.1413 181
P33036 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1495 271.1555 181
P52796 Famprofazone 377.2443 378.2528 181

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G088700 hypothetical protein NA 0
Glyma.20G088800 hypothetical protein NA 0
Glyma.20G088900 hypothetical protein AT1G04360:AT1G04360:RING/U-box superfamily protein 0
Glyma.20G089000 hypothetical protein NA 0
Glyma.20G089100 hypothetical protein AT4G01630:EXPA17:expansin A17 0
Glyma.20G089200 hypothetical protein AT5G03050:AT5G03050:knotted 1-binding protein 0
Glyma.20G089300 hypothetical protein AT3G62010:AT3G62010:metal ion-binding protein 0
Glyma.20G089400 hypothetical protein AT3G02200:AT3G02200:Proteasome component (PCI) domain protein 0
Glyma.20G089500 hypothetical protein AT5G03560:AT5G03560:Tetratricopeptide repeat (TPR)-like superfamily protein 0
Glyma.20G089600 hypothetical protein AT5G26742:emb1138:DEAD box RNA helicase (RH3) 0