Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P41899 Cycloshizukaol A 548.2461 549.2553 219
P49571 Olopatadine n-oxide 353.1566 354.1633 219
P03782 Kikumycin B 317.1599 318.1657 218
P08166 742.1240 743.1314 218
P20028 beta-D-Glucopyranosyl anthranilate 299.1011 300.1073 218
P22124 392.6469 393.6511 218
P27938 Peneciraistin C 398.1535 399.1601 218
P36141 3b-Hydroxy-6b-(3-chloro-2-hydroxy-2-methylbutanoyloxy)-7(11)-eremophilen-12,8b-olide 400.1684 401.1770 218
P36494 5-Hydroxy-1-methylpyrrolidin-2-one 115.0624 116.0694 218
P45909 222.1575 223.1662 218

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G088700 hypothetical protein NA 0
Glyma.20G088800 hypothetical protein NA 0
Glyma.20G088900 hypothetical protein AT1G04360:AT1G04360:RING/U-box superfamily protein 0
Glyma.20G089000 hypothetical protein NA 0
Glyma.20G089100 hypothetical protein AT4G01630:EXPA17:expansin A17 0
Glyma.20G089200 hypothetical protein AT5G03050:AT5G03050:knotted 1-binding protein 0
Glyma.20G089300 hypothetical protein AT3G62010:AT3G62010:metal ion-binding protein 0
Glyma.20G089400 hypothetical protein AT3G02200:AT3G02200:Proteasome component (PCI) domain protein 0
Glyma.20G089500 hypothetical protein AT5G03560:AT5G03560:Tetratricopeptide repeat (TPR)-like superfamily protein 0
Glyma.20G089600 hypothetical protein AT5G26742:emb1138:DEAD box RNA helicase (RH3) 0