Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55548 347.3085 348.3149 —
P55550 16-Methylheptadecanoylcarnitine 427.3718 428.3783 —
P55555 Pro-Pro-Phe 359.1790 360.1862 —
P55556 273.9162 274.9238 —
P55557 177.9525 178.9596 —
P55558 127.9526 128.9604 —
P55560 Evodone 164.0824 329.1720 —
P55562 Isomytiloxanthin 598.4011 599.4090 —
P55563 108.0105 109.0176 —
P55565 (-)-Tetrodecamycin 334.1416 335.1503 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G087700 hypothetical protein AT3G23160:AT3G23160:plant/protein (DUF668) 0
Glyma.20G087800 hypothetical protein AT1G04330:AT1G04330:uncharacterized protein 0
Glyma.20G087900 hypothetical protein AT5G43530:AT5G43530:Helicase protein with RING/U-box domain-containing protein 0
Glyma.20G088000 hypothetical protein AT4G33120:AT4G33120:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0
Glyma.20G088100 hypothetical protein NA 0
Glyma.20G088200 hypothetical protein AT5G43460:AT5G43460:HR-like lesion-inducing protein-like protein 0
Glyma.20G088300 hypothetical protein NA 0
Glyma.20G088400 hypothetical protein NA 0
Glyma.20G088500 hypothetical protein AT3G23200:AT3G23200:Uncharacterized protein family (UPF0497) 0
Glyma.20G088600 hypothetical protein AT4G14410:bHLH104:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0