Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G080500 hypothetical protein NA 0
Glyma.20G080700 hypothetical protein NA 0
Glyma.20G080800 hypothetical protein NA 0
Glyma.20G081000 hypothetical protein AT4G13540:AT4G13540:golgin family A protein 0
Glyma.20G081100 hypothetical protein NA 0
Glyma.20G081600 SMAP1 AT4G13520:SMAP1:small acidic protein 1 0
Glyma.20G081700 hypothetical protein AT2G32630:AT2G32630:Pentatricopeptide repeat (PPR-like) superfamily protein 0
Glyma.20G081900 hypothetical protein AT1G04540:AT1G04540:Calcium-dependent lipid-binding (CaLB domain) family protein__AT2G13350:AT2G13350:Calcium-dependent lipid-binding (CaLB domain) family protein 0
Glyma.20G082000 hypothetical protein AT1G04555:AT1G04555:uncharacterized protein 0
Glyma.20G082100 hypothetical protein NA 0