Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P29285 3-[4-[1-(4-Hydroxy-3-methoxyphenyl)-1,3-dihydroxyisopropoxy]-2-hydroxyphenyl]propyl alpha-L-rhamnopyranoside 510.2086 511.2157 185
P31235 Ethambutol 204.1849 205.1923 185
P31826 TR-Saponin A 1008.5123 1009.5185 185
P36240 IM-2 188.1084 189.1154 185
P05741 Nitrogen mustard N-oxide 171.0221 172.0306 184
P10145 Aspergilone A 386.1900 387.1946 184
P13070 TM 64 314.1218 315.1319 184
P23629 Cycloshizukaol A 548.2409 549.2477 184
P24680 (2S)-2-Hexylsulfanyl-N-[6-methyl-2,4-bis(methylsulfanyl)pyridin-3-yl]decanamide 470.2431 471.2495 184
P25345 Fura-2 641.1548 642.1653 184

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G072200 hypothetical protein NA 0
Glyma.20G072300 hypothetical protein AT4G28950:ROP9:RHO-related protein from plants 9 0
Glyma.20G072400 UR2 uricase-2 isozyme 2 AT2G26230:AT2G26230:uricase / urate oxidase / nodulin 35 0
Glyma.20G072500 hypothetical protein NA 0
Glyma.20G072600 hypothetical protein NA 0
Glyma.20G072700 hypothetical protein AT5G03540:EXO70A1:exocyst subunit exo70 family protein A1 0
Glyma.20G072800 hypothetical protein NA 0
Glyma.20G072900 hypothetical protein NA 0
Glyma.20G073000 hypothetical protein NA 0
Glyma.20G073100 hypothetical protein NA 0