Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55501 TRIETHYLENE GLYCOL 150.0886 151.0965 —
P55504 242.8763 243.8834 —
P55505 278.8958 279.9028 —
P55506 Cycloaspeptide D 627.2976 628.3046 —
P55509 Insularine 2beta-N-oxide 636.2833 637.2873 —
P55518 116.9519 117.9590 —
P55519 4-Chloro-7-nitrobenzofurazan 198.9770 199.9844 —
P55520 236.8846 237.8918 —
P55521 Lupinine 169.1454 170.1523 —
P55523 Cefapime 462.1075 463.1113 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G064000 hypothetical protein NA 0
Glyma.20G064200 hypothetical protein NA 0
Glyma.20G064300 hypothetical protein NA 0
Glyma.20G064400 hypothetical protein NA 0
Glyma.20G064500 hypothetical protein NA 0
Glyma.20G064700 hypothetical protein AT3G22290:AT3G22290:Endoplasmic reticulum vesicle transporter protein 0
Glyma.20G064800 hypothetical protein NA 0
Glyma.20G064900 hypothetical protein NA 0
Glyma.20G065000 hypothetical protein AT2G22330:CYP79B3:cytochrome P450, family 79, subfamily B, polypeptide 3__AT1G79370:CYP79C1:cytochrome P450, family 79, subfamily C, polypeptide 1 0
Glyma.20G065300 hypothetical protein AT3G07620:AT3G07620:glycosyltransferase 0