Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55524 Triphenyl phosphate 326.0699 327.0759 —
P55527 583.4623 584.4696 —
P55529 282.6336 283.6414 —
P55535 (5Z)-3-decanoyloxy-dodecenoic acid 368.2867 369.2942 —
P55536 IM-2 188.1076 189.1141 —
P55538 TRIMELLITIC ANHYDRIDE 192.0027 193.0100 —
P55539 3-Acetoxy-hexadecanoic acid 314.2449 315.2510 —
P55543 258.8918 259.8994 —
P55544 Dovyalicin F 407.2564 408.2631 —
P55546 138.9783 139.9860 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G061500 hypothetical protein AT5G41270:AT5G41270:RNase P Rpr2/Rpp21 subunit domain protein 0
Glyma.20G061700 hypothetical protein NA 0
Glyma.20G061800 hypothetical protein NA 0
Glyma.20G062000 hypothetical protein AT2G04430:NUDT5:nudix hydrolase homolog 5 0
Glyma.20G062100 hypothetical protein NA 0
Glyma.20G062400 hypothetical protein NA 0
Glyma.20G062500 hypothetical protein AT3G17640:AT3G17640:Leucine-rich repeat (LRR) family protein 0
Glyma.20G062600 hypothetical protein NA 0
Glyma.20G062700 hypothetical protein AT4G15160:AT4G15160:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.20G062900 hypothetical protein NA 0