Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24428 Talniflumate 414.0784 415.0855 205
P25466 Niazinin 343.1126 344.1185 205
P15762 Aristoloterpenate II 527.1950 528.2020 204
P03342 D-Alanyl-alanyl-poly(glycerolphosphate) 314.0858 315.0931 203
P05821 Pandangolide 3 362.1408 363.1478 203
P12578 4E,6E-undecenal 166.1341 167.1417 203
P14723 1-(9Z-octadecenoyl)-2-(5-oxo-7-carboxy-6E-heptenoyl)-sn-glycero-3-phosphoserine 691.3337 692.3416 203
P53229 Leurubicin 656.2476 657.2525 203
P13994 2-Methyl-1-hydroxypropyl-ThPP 496.0955 497.1062 202
P39176 Microtoenin C 941.5023 942.5093 202

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G057000 hypothetical protein NA 0
Glyma.20G057100 hypothetical protein AT2G04740:AT2G04740:ankyrin repeat family protein 0
Glyma.20G057200 hypothetical protein NA 0
Glyma.20G057800 hypothetical protein NA 0
Glyma.20G057900 hypothetical protein NA 0
Glyma.20G058100 hypothetical protein AT2G21530:AT2G21530:SMAD/FHA domain-containing protein 0
Glyma.20G058200 hypothetical protein AT3G01790:AT3G01790:Ribosomal protein L13 family protein 0
Glyma.20G058400 hypothetical protein AT2G31340:emb1381:embryo defective 1381 0
Glyma.20G058700 hypothetical protein NA 0
Glyma.20G058800 hypothetical protein AT1G65520:ECI1:delta(3), delta(2)-enoyl CoA isomerase 1 0