Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55524 Triphenyl phosphate 326.0699 327.0759 —
P55527 583.4623 584.4696 —
P55529 282.6336 283.6414 —
P55535 (5Z)-3-decanoyloxy-dodecenoic acid 368.2867 369.2942 —
P55536 IM-2 188.1076 189.1141 —
P55538 TRIMELLITIC ANHYDRIDE 192.0027 193.0100 —
P55539 3-Acetoxy-hexadecanoic acid 314.2449 315.2510 —
P55543 258.8918 259.8994 —
P55544 Dovyalicin F 407.2564 408.2631 —
P55546 138.9783 139.9860 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G050800 Superoxide dismutase AT5G23310:FSD3:Fe superoxide dismutase 3 0
Glyma.20G050900 hypothetical protein AT5G21140:emb1379:embryo defective 1379 0
Glyma.20G051000 hypothetical protein NA 0
Glyma.20G051200 hypothetical protein AT5G17410:AT5G17410:Spc97 / Spc98 family of spindle pole body (SBP) component 0
Glyma.20G051300 hypothetical protein NA 0
Glyma.20G051400 hypothetical protein NA 0
Glyma.20G051500 hypothetical protein AT3G20770:EIN3:Ethylene insensitive 3 family protein 0
Glyma.20G051600 hypothetical protein AT5G21105:AT5G21105:Plant L-ascorbate oxidase 0
Glyma.20G051700 hypothetical protein AT5G21105:AT5G21105:Plant L-ascorbate oxidase__AT5G21100:AT5G21100:Plant L-ascorbate oxidase 0
Glyma.20G052000 hypothetical protein AT3G45100:SETH2:UDP-Glycosyltransferase superfamily protein 0