Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08612 Scrophuloside A7 752.2562 753.2657 161
P13827 (3-Nitrobenzoyl)alanine 238.0564 239.0640 161
P16053 Luteolin 7-galacturonide-4'-glucoside 624.1286 625.1388 161
P21570 (6E)-8-Oxogeraniol 168.1140 169.1209 161
P26728 1-nonen-3-one 140.1196 141.1267 161
P30204 Theasaponin C1 1174.5741 1175.5812 161
P36301 Dactylamide A 448.2163 449.2208 161
P46130 AMD 070 349.2298 350.2359 161
P50455 Carrageenan, potassium salt of 347.2545 348.2597 161
P11076 Amino leucine 146.1063 147.1143 160

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 249
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 249
Glyma.09G177400 hypothetical protein NA 248
Glyma.15G047100 hypothetical protein AT1G71240:AT1G71240:chromosome-partitioning protein, putative (DUF639) 248
Glyma.15G047800 hypothetical protein AT1G33270:AT1G33270:Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 248
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 248
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 247
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 246
Glyma.09G059700 hypothetical protein AT4G29940:PRHA:pathosis related homeodomain protein A 245
Glyma.09G059600 hypothetical protein AT4G30010:AT4G30010:ATP-dependent RNA helicase 242