Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54799 Allosamidin 622.2712 623.2775 —
P54800 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1085 245.2248 —
P54801 Mollicellin F 432.0544 433.0617 —
P54803 2-[6,8-Dichloro-2-(4-chlorophenyl)imidazo[1,2-a]pyridin-3-yl]-N,N-dipropylacetamide 437.0835 438.0911 —
P54804 Humantenidine 342.1592 343.1636 —
P54817 Fomlactone A 526.3682 527.3736 —
P54826 N-Pyrrolidino etonitazene 394.2054 395.2141 —
P54828 Benzothiazole 135.0134 136.0207 —
P54833 N6-[2-[5-(Diethylamino)pentan-2-ylamino]-6-methyl-4-pyrimidinyl]-2-methylquinoline-4,6-diamine 421.2946 422.2998 —
P54834 2-Chloro-N-[1-[(2R)-2,3-dihydroxypropyl]-2-oxo-3,4-dihydroquinolin-3-yl]-6H-thieno[2,3-b]pyrrole-5-carboxamide 419.0718 420.0789 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 249
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 249
Glyma.09G177400 hypothetical protein NA 248
Glyma.15G047100 hypothetical protein AT1G71240:AT1G71240:chromosome-partitioning protein, putative (DUF639) 248
Glyma.15G047800 hypothetical protein AT1G33270:AT1G33270:Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 248
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 248
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 247
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 246
Glyma.09G059700 hypothetical protein AT4G29940:PRHA:pathosis related homeodomain protein A 245
Glyma.09G059600 hypothetical protein AT4G30010:AT4G30010:ATP-dependent RNA helicase 242