Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P12624 Dillapional 236.0693 237.0750 107
P13391 1-(Indol-3-yl)propanol 3-phosphate 255.0623 256.0689 107
P14295 119.0438 120.0517 107
P14540 2-Propylphenol 136.0876 137.0944 107
P15095 Tryptophyl-Lysine 332.1868 333.1906 107
P18177 4-Amino-5-chloro-N-[(3S,4R)-1-[3-(4-fluorophenoxy)propyl]-3-methoxypiperidin-4-yl]-2-hydroxybenzamide 451.1639 452.1709 107
P24091 Folimine 219.0916 220.0996 107
P25220 methyl 5S,6S-diacetoxy-9-oxo-10-chloro-12R-hydroxy-7E,10E,14Z,17Z-prostatetraenoate-cyclo[8,12R] 496.1890 497.1956 107
P27435 2,4-Diamino-6-dimethylamino-1,3,5-triazine 154.0977 155.1056 107
P30791 559.1473 560.1513 107

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 249
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 249
Glyma.09G177400 hypothetical protein NA 248
Glyma.15G047100 hypothetical protein AT1G71240:AT1G71240:chromosome-partitioning protein, putative (DUF639) 248
Glyma.15G047800 hypothetical protein AT1G33270:AT1G33270:Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 248
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 248
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 247
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 246
Glyma.09G059700 hypothetical protein AT4G29940:PRHA:pathosis related homeodomain protein A 245
Glyma.09G059600 hypothetical protein AT4G30010:AT4G30010:ATP-dependent RNA helicase 242