Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08554 Jasminoside A 330.1644 331.1724 127
P10082 Trifuhalol B 390.0587 391.0660 127
P10739 Antibiotic D 788-7 515.1878 516.1962 127
P10870 Isorhamnetin 3-sophoroside-7-glucoside 802.2147 803.2205 127
P12319 Didemethylcitalopram 296.1334 297.1412 127
P13946 Ethyl (E)-3-diethoxyphosphinothioyloxybut-2-enoate 282.0724 283.0815 127
P14285 Triethylene glycol dimethacrylate 286.1392 287.1451 127
P19144 4-Fluoro-1-[2-[(4-methyl-1-methylsulfonylpiperidin-4-yl)amino]acetyl]pyrrolidine-2-carbonitrile 346.1459 347.1558 127
P20602 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2883 965.2932 127
P21706 dTDP-4-hydroxyamino-4,6-dideoxy-alpha-D-glucose 563.1008 564.1089 127

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 249
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 249
Glyma.09G177400 hypothetical protein NA 248
Glyma.15G047100 hypothetical protein AT1G71240:AT1G71240:chromosome-partitioning protein, putative (DUF639) 248
Glyma.15G047800 hypothetical protein AT1G33270:AT1G33270:Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 248
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 248
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 247
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 246
Glyma.09G059700 hypothetical protein AT4G29940:PRHA:pathosis related homeodomain protein A 245
Glyma.09G059600 hypothetical protein AT4G30010:AT4G30010:ATP-dependent RNA helicase 242