Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55548 347.3085 348.3149 —
P55550 16-Methylheptadecanoylcarnitine 427.3718 428.3783 —
P55555 Pro-Pro-Phe 359.1790 360.1862 —
P55556 273.9162 274.9238 —
P55557 177.9525 178.9596 —
P55558 127.9526 128.9604 —
P55560 Evodone 164.0824 329.1720 —
P55562 Isomytiloxanthin 598.4011 599.4090 —
P55563 108.0105 109.0176 —
P55565 (-)-Tetrodecamycin 334.1416 335.1503 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G040200 hypothetical protein NA 0
Glyma.20G040300 hypothetical protein NA 0
Glyma.20G040400 hypothetical protein AT5G19410:ABCG23:ABC-2 type transporter family protein 0
Glyma.20G040500 hypothetical protein NA 0
Glyma.20G040600 Non-specific phospholipase C2 AT2G26870:NPC2:non-specific phospholipase C2 0
Glyma.20G040800 hypothetical protein NA 0
Glyma.20G040900 hypothetical protein AT3G49420:AT3G49420:Got1/Sft2-like vescicle transport protein family 0
Glyma.20G041000 hypothetical protein AT4G29070:AT4G29070:Phospholipase A2 family protein 0
Glyma.20G041100 hypothetical protein AT4G13970:AT4G13970:zinc ion binding protein 0
Glyma.20G041200 hypothetical protein AT5G19380:CLT1:CRT (chloroquine-resistance transporter)-like transporter 1 0