Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55585 611.1724 612.1787 —
P55586 Cadiamine 282.1961 565.4004 —
P55587 248.9018 249.9090 —
P55589 Chromoionophore I 583.4124 584.4189 —
P55590 106.5089 107.5161 —
P55591 Gallamonum 423.3521 424.3614 —
P55592 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2697 417.2779 —
P55593 627.2766 628.2811 —
P55596 Pyrido[2,3-d]pyrimidin-2(1H)-one, 4-cyclohexyl-1-ethyl-7-methyl- 271.1694 272.1771 —
P55599 423.3589 424.3642 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G025000 hypothetical protein AT4G26410:AT4G26410:chromosome-associated kinesin 0
Glyma.20G025200 hypothetical protein AT3G13400:sks13:SKU5 similar 13 0
Glyma.20G025300 hypothetical protein NA 0
Glyma.20G025400 hypothetical protein AT2G03667:AT2G03667:Asparagine synthase family protein 0
Glyma.20G025600 hypothetical protein AT2G03510:AT2G03510:SPFH/Band 7/PHB domain-containing membrane-associated protein family 0
Glyma.20G025800 hypothetical protein AT1G13830:AT1G13830:Carbohydrate-binding X8 domain superfamily protein 0
Glyma.20G025900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 0
Glyma.20G026200 hypothetical protein NA 0
Glyma.20G026400 hypothetical protein AT1G26570:UGD1:UDP-glucose dehydrogenase 1 0
Glyma.20G026500 hypothetical protein AT1G26580:AT1G26580:ELM2 domain protein__AT2G03470:AT2G03470:ELM2 domain-containing protein 0